Equipment​

The CG platform has access to specialized equipment and analytical frameworks that enable us to introduce new high-throughput techniques into healthcare. 

We continuously explore emerging genomics technologies to facilitate the integration of genomics-based precision diagnostics and precision medicine in Sweden. Please note that only relevant equipment is listed and not all listed equipment is available for access service (User access service refers to a service that some nodes provide, where users, after receiving proper training and accreditation, are granted access to the equipment to operate it independently) Contact us if you have any enquiries regarding our capabilities.

  • Automatic robotic systems
    • BRAVO NGS Workstation, Hamilton NGS Star, Beckman i5 Automated Workstation, Myra Liquid Handling Station, Magnis NGS Prep system, Tecan Fluent 480, Tecan Fluent 780, Diagenode Megaruptor® 3
  • Various systems for QC, quantification and fragment analyses
    • TapeStation, Quantification using fluorescent assay (Qubit, Quantit), Agilent Fragment Analyzer, Agilent Femto Pulse, Diagenode Megaruptor® 3 
  • Instrumentation for microarray analysis 
    • Affymetrix microarray, HiScan, NextSeq550, iScan
  • Instrumentation for Sanger sequencing 
    • ABI 3500, ABI3500 xL  
  • Instrumentation for library preparation including single cell 
    • Mission Bio Tapestri, 10x Chromium Genomics  
  • Instrumentation for real time PCR and ddPCR
    • BioRad qPCR, QIAcuity I, ABI QuantStudio 6, QX200 Droplet Digital PCR System, ABI 7500, ABI QuantStudio 7 flex  
  • Instrumentation for Multispectral imaging 
    • Saphyr optical mapper  
  • Sequencing platforms
    • Illumina (iSeq, MiniSeq, MiSeq, NextSeq 500, NextSeq 550, NextSeq 550 Dx, NextSeq 2000, NovaSeq 6000, NovaSeq 6000 Dx, NovaSeq X)
    • Ion Torrent (Ion S5, Ion S5 Prime, Ion Torrent PGM, Genexus system)
    • Nanopore (MinION, GridION, PromethION)
    • Nanostsring (GeoMx, nCounter)
    • Qiagen (GeneReader)
    • PacBio (Revio)

Our advanced analytical pipelines undergo continuous enhancement through a national collaboration among various CG nodes, GMS, and other initiatives. Additionally, we have developed open-source bioinformatics tools for the wider research community. Visit github.com/Clinical-Genomics for more information.

Contact us if you have any enquiries regarding our capabilities